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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801704.1_cds_XP_016476706.1_6824
CDS Infomation

[gene=LOC107798232] [db_xref=GeneID:107798232] [protein=metal-nicotianamine transporter YSL1-like isoform X2] [protein_id=XP_016476706.1] [location=join(21506..21875,21980..22152,22241..22335,22416..22550,22874..23063,23160..23274,23376..24301)] [gbkey=CDS]
Sequence

ATGAATAACAATAGAGAACTAGAGCAAGTTCGCGATTTGGCTGTAGAAGAACATGAGGGG
GAGGAGGAGGAGGAACAATTATCCGAGAGTACGATGAGAATTCAACCTTGGACTAAACAG
ATCACGTTACGAGGAATCATTGCTAGTACGATAATTGGATGCATTTACAGTGTTATACAA
ATGAAAATGAACCTCACAACTGGAATTAATCCTAATCTGAATGTCTCAGCTGCTCTTCTT
GCCTATATTTTTATTCAGACATGGACCAAGATTCTTAAAATGCTTGGTTTTGTCTCTGTT
CCTTTTACTAGACAGGAAAATACCATGATACAAACATGTTCTGTTGCATGTTACAGCATT
GCTCTTGGAGGTGGATTAGGATCTTATTTGTTGGGAATGGACAAGAAAACTTATGAGTTA
GCGGGTGTTGGTACTATGGGAAATACATCAAACAGTTACAAAAAACTTGAGATTGGTTGG
ATGATTGGCTATCTTCTAGTAGTTTGTTTTATTGGCCTTTTCGTATTGGTTCCTCTTCGA
AAGGTGTTGATAGTGGATTATAAGTTGACATTTCCAACTGGAATGGCTACTGCAGTTCTT
ATTAATGGTTTTCATGGGAAGAGTGATAAGCTAGCTAGAAAGCAAGTGAAGAGTTTCCTC
AAGTTTTTTAGCTATAGTTTTTCATGGGCTTTCTTTCAGTGGTTTTATACTGGCAAAGAG
GATTGTGGATTTCAACAGTTTCCTACTTTTGGATTGAAAGCCTGGAAACAAACATTTTAT
TTTGATTTTAGCTTGACTTATGTGGGAACTGGAATGATATGTCCACATATAGTGAACATA
TCATTGCTTCTTGGAGCTGTTCTTTCATGGGGTGTAATGTGGCCTCTCATTGCAAAACTT
AAAGGAGAATGGTTCCCTGCTGATATACCTGAATCCAGTATGAAAAGCCTTAACGGTTAC
AAGGTCTTCATCTCCATTGCCCTCCTACTTGGCGACGGCCTTTACAATTTTGTCAAGATA
ATGTACTTCACACTAGGCAGTGTTCATGAGAGGTTCAAACGCAAAAATCTAAGTCCAGCT
GGGGTAAGACAGAACAAGAACTCAGGGGATGTAAAATATGATGAAGCCTTTCTTAGAGAA
AGCATTCCAATGTGGTTTGGAGGTGTAGGGTATTTAGCCTTGGGAACTATTGCTGTGATT
ATGATTCCATTAATTTTCCATGAGATCAAATGGTATTGGGTTATCATAGCCTATCTTTTT
GCTCCATCTTTAGCTTTCTGCAACGCGTATGGTTCTGGTTTGACTGATATAAACATGGCC
TATAACTATGGAAAAGTTGGACTTTTTATGATGGCTGCATTGGCTGGTAAAGAACATGGT
GTTATTGCTGGTTTAGCTGGTTGTGGTTTGATCAAGTCAGTGGCTAACGTTTCTTGCATT
CTGATGCAAGATTTTAAGACAGGGCACTTAACTTTGACATCTCCAAAAACTATGTTTCTC
AGCCAGGCTATTGGCACAGCCTTAGGCTGTGTGATTGGGCCACTAAGCTTCTTCTTGTTC
TACAATGCCTTTGATATTGGCAACCCCAATGGTGAATTCAAGGCTCCTTATGCATTGATT
TATCGAAATATGGCGATTATTAGTGTTCAAGGTGTCTCGGCTTTGCCTCACCACTGTTTG
CAGCTGTGTTATGGCTTCTTTGCATTTGCTGTTGCAATAAATTTGGTGAAAGATCTTTCT
CCAGAGAAGATAGGGAAATGGATGCCACTGCCTATGGCGATGGCGGTGCCCTTTCTAATT
GGTGGATATTTTGGTATTGATATGTGCATAGGAAGTTTGGTTGTATTTGTGTGGCATAAA
CTTAACTCTAAGAAGGCTAAGGTGATGGTTCCAGCAGTTGCTTCTGGTTTGATCTGTGGA
GAAGGTTTATGGATTCTTCCTGCATCTATCCTTGCTTTGGCCAGAGTAACTCCTCCCATT
TGCATGAAATTTTTGGCTTCTTAA

Peptide Sequence

PEP ID

XP_016476706.1
PEP Infomation

PREDICTED: metal-nicotianamine transporter YSL1-like isoform X2 [Nicotiana tabacum]
Sequence

MNNNRELEQVRDLAVEEHEGEEEEEQLSESTMRIQPWTKQITLRGIIASTIIGCIYSVIQ
MKMNLTTGINPNLNVSAALLAYIFIQTWTKILKMLGFVSVPFTRQENTMIQTCSVACYSI
ALGGGLGSYLLGMDKKTYELAGVGTMGNTSNSYKKLEIGWMIGYLLVVCFIGLFVLVPLR
KVLIVDYKLTFPTGMATAVLINGFHGKSDKLARKQVKSFLKFFSYSFSWAFFQWFYTGKE
DCGFQQFPTFGLKAWKQTFYFDFSLTYVGTGMICPHIVNISLLLGAVLSWGVMWPLIAKL
KGEWFPADIPESSMKSLNGYKVFISIALLLGDGLYNFVKIMYFTLGSVHERFKRKNLSPA
GVRQNKNSGDVKYDEAFLRESIPMWFGGVGYLALGTIAVIMIPLIFHEIKWYWVIIAYLF
APSLAFCNAYGSGLTDINMAYNYGKVGLFMMAALAGKEHGVIAGLAGCGLIKSVANVSCI
LMQDFKTGHLTLTSPKTMFLSQAIGTALGCVIGPLSFFLFYNAFDIGNPNGEFKAPYALI
YRNMAIISVQGVSALPHHCLQLCYGFFAFAVAINLVKDLSPEKIGKWMPLPMAMAVPFLI
GGYFGIDMCIGSLVVFVWHKLNSKKAKVMVPAVASGLICGEGLWILPASILALARVTPPI
CMKFLAS

Transcript Sequence

Gene sequence data has not been registered.